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scimo: Extra Recipes Steps for Dealing with Omics Data

Omics data (e.g. transcriptomics, proteomics, metagenomics...) offer a detailed and multi-dimensional perspective on the molecular components and interactions within complex biological (eco)systems. Analyzing these data requires adapted procedures, which are implemented as steps according to the 'recipes' package.

Version:0.0.3
Depends:R (≥ 2.10),recipes (≥ 1.1)
Imports:dplyr,generics,magrittr,rlang, stats,tibble,tidyr
Suggests:ggplot2,knitr,rmarkdown,testthat (≥ 3.0.0)
Published:2025-07-24
DOI:10.32614/CRAN.package.scimo
Author:Antoine BICHATORCID iD [aut, cre], Julie AUBERTORCID iD [ctb]
Maintainer:Antoine BICHAT <antoine.bichat at proton.me>
BugReports:https://github.com/abichat/scimo/issues
License:GPL (≥ 3)
URL:https://github.com/abichat/scimo
NeedsCompilation:no
Materials:README,NEWS
CRAN checks:scimo results

Documentation:

Reference manual:scimo.html ,scimo.pdf
Vignettes:Pediatric cancers (source,R code)

Downloads:

Package source: scimo_0.0.3.tar.gz
Windows binaries: r-devel:scimo_0.0.3.zip, r-release:scimo_0.0.3.zip, r-oldrel:scimo_0.0.3.zip
macOS binaries: r-release (arm64):scimo_0.0.3.tgz, r-oldrel (arm64):scimo_0.0.3.tgz, r-release (x86_64):scimo_0.0.3.tgz, r-oldrel (x86_64):scimo_0.0.3.tgz
Old sources: scimo archive

Linking:

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