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dynwrap: Representing and Inferring Single-Cell Trajectories

Provides functionality to infer trajectories from single-cell data, represent them into a common format, and adapt them. Other biological information can also be added, such as cellular grouping, RNA velocity and annotation. Saelens et al. (2019) <doi:10.1038/s41587-019-0071-9>.

Version:1.2.5
Depends:R (≥ 3.0.0)
Imports:assertthat,babelwhale,crayon,dplyr,dynutils (≥ 1.0.3),dynparam,igraph,glue,magrittr,Matrix, methods,purrr (≥1.0.0),processx,readr,stringr,reshape2,tibble,tidyr,yaml
Suggests:covr,dyndimred,hdf5r,knitr,pkgload,ranger,rmarkdown,testthat
Published:2025-11-26
DOI:10.32614/CRAN.package.dynwrap
Author:Robrecht CannoodtORCID iD [aut, cre], Wouter SaelensORCID iD [aut]
Maintainer:Robrecht Cannoodt <rcannood at gmail.com>
BugReports:https://github.com/dynverse/dynwrap/issues
License:MIT + fileLICENSE
URL:https://github.com/dynverse/dynwrap
NeedsCompilation:no
Citation:dynwrap citation info
Materials:README,NEWS
In views:Omics
CRAN checks:dynwrap results

Documentation:

Reference manual:dynwrap.html ,dynwrap.pdf
Vignettes:Creating a TI method: Container (source,R code)
Creating a TI method: Script (source,R code)
Creating a TI method: R (source,R code)
Creating a TI method: Wrapping trajectories (source,R code)

Downloads:

Package source: dynwrap_1.2.5.tar.gz
Windows binaries: r-devel:dynwrap_1.2.5.zip, r-release:dynwrap_1.2.5.zip, r-oldrel:dynwrap_1.2.5.zip
macOS binaries: r-release (arm64):dynwrap_1.2.5.tgz, r-oldrel (arm64):dynwrap_1.2.5.tgz, r-release (x86_64):dynwrap_1.2.5.tgz, r-oldrel (x86_64):dynwrap_1.2.5.tgz
Old sources: dynwrap archive

Reverse dependencies:

Reverse imports:SCORPIUS
Reverse suggests:dyngen

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=dynwrapto link to this page.


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