treestructure: Detect Population Structure Within Phylogenetic Trees
Algorithms for detecting population structure from the history of coalescent events recorded in phylogenetic trees. This method classifies each tip and internal node of a tree into disjoint sets characterized by similar coalescent patterns.
| Version: | 0.7.0 |
| Depends: | R (≥ 4.1.0) |
| Imports: | ape (≥ 5.0),rlang |
| LinkingTo: | Rcpp |
| Suggests: | ggtree,ggplot2,knitr,rmarkdown,getopt,bookdown,phangorn,treeio |
| Published: | 2025-09-27 |
| DOI: | 10.32614/CRAN.package.treestructure |
| Author: | Erik Volz [aut, cre], Fabricia F. Nascimento [ctb], Vinicius B. Franceschi [ctb] |
| Maintainer: | Erik Volz <erik.volz at gmail.com> |
| BugReports: | https://github.com/emvolz-phylodynamics/treestructure/issues |
| License: | GPL-2 |GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | https://emvolz-phylodynamics.github.io/treestructure/,https://github.com/emvolz-phylodynamics/treestructure |
| NeedsCompilation: | yes |
| CRAN checks: | treestructure results |
Documentation:
Downloads:
| Package source: | treestructure_0.7.0.tar.gz |
| Windows binaries: | r-devel:treestructure_0.7.0.zip, r-release:treestructure_0.7.0.zip, r-oldrel:treestructure_0.7.0.zip |
| macOS binaries: | r-release (arm64):treestructure_0.7.0.tgz, r-oldrel (arm64):treestructure_0.7.0.tgz, r-release (x86_64):treestructure_0.7.0.tgz, r-oldrel (x86_64):treestructure_0.7.0.tgz |
| Old sources: | treestructure archive |
Linking:
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