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ripserr: Calculate Persistent Homology with Ripser-Based Engines

Ports the Ripser <doi:10.48550/arXiv.1908.02518> and Cubical Ripser <doi:10.48550/arXiv.2005.12692> persistent homology calculation engines from C++. Can be used as a rapid calculation tool in topological data analysis pipelines.

Version:1.0.0
Depends:R (≥ 3.5.0)
Imports:Rcpp (≥ 1.0), stats (≥ 3.0), utils (≥ 3.0)
LinkingTo:Rcpp
Suggests:covr (≥ 3.5),knitr (≥ 1.29),rmarkdown (≥ 2.3),testthat (≥ 2.3),lmtest
Published:2025-06-27
DOI:10.32614/CRAN.package.ripserr
Author:Raoul R. WadhwaORCID iD [aut], Matt Piekenbrock [aut], Jason Cory BrunsonORCID iD [aut, cre], Xinyi Zhang [aut], Alice ZhangORCID iD [aut], Kent Phipps [aut], Sean Hershkowitz [aut], Emily Noble [ctb], Aymeric StammORCID iD [ctb], Aidan Bryant [ctb], James Golabek [ctb], Jacob G. ScottORCID iD [ldr], Ulrich Bauer [cph, ctb] (Ripser; MIT license), Takeki Sudo [cph, ctb] (Cubical Ripser; GPL-3 license), Kazushi Ahara [cph, ctb] (Cubical Ripser; GPL-3 license)
Maintainer:Jason Cory Brunson <cornelioid at gmail.com>
BugReports:https://github.com/tdaverse/ripserr/issues
License:GPL-3
URL:https://github.com/tdaverse/ripserr/
NeedsCompilation:yes
Materials:NEWS
CRAN checks:ripserr results

Documentation:

Reference manual:ripserr.html ,ripserr.pdf
Vignettes:Calculating Persistent Homology with a Cubical Complex (source,R code)
Modeling Cases of Mosquito-Borne Disease Using Persistent Homology (source,R code)
Calculating Persistent Homology with a Vietoris-Rips Complex (source,R code)

Downloads:

Package source: ripserr_1.0.0.tar.gz
Windows binaries: r-devel:ripserr_1.0.0.zip, r-release:ripserr_1.0.0.zip, r-oldrel:ripserr_1.0.0.zip
macOS binaries: r-release (arm64):ripserr_1.0.0.tgz, r-oldrel (arm64):ripserr_1.0.0.tgz, r-release (x86_64):ripserr_1.0.0.tgz, r-oldrel (x86_64):ripserr_1.0.0.tgz
Old sources: ripserr archive

Reverse dependencies:

Reverse suggests:tdarec

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=ripserrto link to this page.


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