Next-Generation Clustered Heat Maps (NG-CHMs) allow for dynamic exploration of heat map data in a web browser. 'NGCHM' allows users to create both stand-alone HTML files containing a Next-Generation Clustered Heat Map, and .ngchm files to view in the NG-CHM viewer. See Ryan MC, Stucky M, et al (2020) <doi:10.12688/f1000research.20590.2> for more details.
| Version: | 1.0.4 |
| Depends: | R (≥ 3.5.0) |
| Imports: | digest, grDevices,htmltools,httr,jsonlite,logger (≥0.2.0), methods, stats,tsvio, utils |
| Suggests: | knitr,rmarkdown,Rtsne,testthat,umap,uwot |
| Enhances: | NGCHMDemoData, NGCHMSupportFiles |
| Published: | 2024-12-17 |
| DOI: | 10.32614/CRAN.package.NGCHM |
| Author: | Bradley M Broom [aut], Mary A Rohrdanz [ctb, cre], Chris Wakefield [ctb], James M Melott [ctb], MD Anderson Cancer Center [cph] |
| Maintainer: | Mary A Rohrdanz <marohrdanz at mdanderson.org> |
| License: | GPL-3 |
| URL: | https://md-anderson-bioinformatics.github.io/NGCHM-R/,https://github.com/MD-Anderson-Bioinformatics/NGCHM-R |
| NeedsCompilation: | no |
| SystemRequirements: | Java (>= 11) Git |
| Additional_repositories: | https://md-anderson-bioinformatics.r-universe.dev |
| Materials: | README |
| CRAN checks: | NGCHM results |