SKAT: SNP-Set (Sequence) Kernel Association Test
Functions for kernel-regression-based association tests including Burden test, SKAT and SKAT-O. These methods aggregate individual SNP score statistics in a SNP set and efficiently compute SNP-set level p-values.
| Version: | 2.2.5 |
| Depends: | R (≥ 2.13.0),Matrix,SPAtest,RSpectra |
| Published: | 2023-01-15 |
| DOI: | 10.32614/CRAN.package.SKAT |
| Author: | Seunggeun (Shawn) Lee and Zhangchen Zhao, with contributions from Larisa Miropolsky and Michael Wu |
| Maintainer: | Seunggeun (Shawn) Lee <lee7801 at snu.ac.kr> |
| License: | GPL-2 |GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | yes |
| CRAN checks: | SKAT results |
Documentation:
Downloads:
Reverse dependencies:
| Reverse depends: | FSTpackage,GenoScan,LGEWIS,LGRF,WGScan,ZIM4rv |
| Reverse imports: | AllelicSeries,GBJ,MetaSKAT,SAIGEgds,SMUT,zfa |
| Reverse suggests: | BGData,bigQF,FastKM,GRAB,seqminer |
Linking:
Please use the canonical formhttps://CRAN.R-project.org/package=SKATto link to this page.