A tool for simulating rhythmic data: transcriptome data using Gaussian or negative binomial distributions, and behavioral activity data using Bernoulli or Poisson distributions. See Singer et al. (2019) <doi:10.7717/peerj.6985>.
| Version: | 1.0.3 |
| Depends: | R (≥ 3.4) |
| Imports: | data.table (≥ 1.11.4),foreach (≥ 1.4.4) |
| Suggests: | ggplot2 (≥ 3.0.0),kableExtra (≥ 0.9.0),knitr (≥ 1.20),limma (≥ 3.34.9),precrec (≥ 0.9.1),rmarkdown (≥ 1.9),testthat (≥ 2.0.0) |
| Published: | 2022-08-09 |
| DOI: | 10.32614/CRAN.package.simphony |
| Author: | Jake Hughey [aut, cre], Jordan Singer [aut], Darwin Fu [ctb] |
| Maintainer: | Jake Hughey <jakejhughey at gmail.com> |
| License: | GPL-2 |
| URL: | https://simphony.hugheylab.org,https://github.com/hugheylab/simphony |
| NeedsCompilation: | no |
| Materials: | NEWS |
| CRAN checks: | simphony results |
| Reference manual: | simphony.html ,simphony.pdf |
| Vignettes: | Using simphony's various options (source,R code) Using simphony to evaluate rhythm detection (source,R code) |
| Package source: | simphony_1.0.3.tar.gz |
| Windows binaries: | r-devel:simphony_1.0.3.zip, r-release:simphony_1.0.3.zip, r-oldrel:simphony_1.0.3.zip |
| macOS binaries: | r-release (arm64):simphony_1.0.3.tgz, r-oldrel (arm64):simphony_1.0.3.tgz, r-release (x86_64):simphony_1.0.3.tgz, r-oldrel (x86_64):simphony_1.0.3.tgz |
| Old sources: | simphony archive |
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