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cotram: Count Transformation Models

Count transformation models featuring parameters interpretable as discrete hazard ratios, odds ratios, reverse-time discrete hazard ratios, or transformed expectations. An appropriate data transformation for a count outcome and regression coefficients are simultaneously estimated by maximising the exact discrete log-likelihood using the computational framework provided in package 'mlt', technical details are given in Siegfried & Hothorn (2020) <doi:10.1111/2041-210X.13383>. The package also contains an experimental implementation of multivariate count transformation models with an application to multi-species distribution models <doi:10.48550/arXiv.2201.13095>.

Version:0.6-0
Depends:R (≥ 3.5.0),tram (≥ 1.3-0),mlt (≥ 1.7-0)
Imports:variables (≥ 1.0-2),basefun (≥ 1.0-5),survival, utils,qrng
Suggests:TH.data,knitr,lattice,colorspace,multcomp,mvtnorm,numDeriv,viridis,Hmsc
Published:2025-11-19
DOI:10.32614/CRAN.package.cotram
Author:Sandra SiegfriedORCID iD [aut, cre], Luisa BarbantiORCID iD [aut], Torsten HothornORCID iD [aut]
Maintainer:Sandra Siegfried <sandra.siegfried at alumni.uzh.ch>
License:GPL-2
URL:http://ctm.R-forge.R-project.org
NeedsCompilation:no
Citation:cotram citation info
Materials:NEWS
CRAN checks:cotram results

Documentation:

Reference manual:cotram.html ,cotram.pdf
Vignettes:cotram (source,R code)

Downloads:

Package source: cotram_0.6-0.tar.gz
Windows binaries: r-devel:cotram_0.6-0.zip, r-release:cotram_0.6-0.zip, r-oldrel:cotram_0.6-0.zip
macOS binaries: r-release (arm64):cotram_0.6-0.tgz, r-oldrel (arm64):cotram_0.6-0.tgz, r-release (x86_64):cotram_0.6-0.tgz, r-oldrel (x86_64):cotram_0.6-0.tgz
Old sources: cotram archive

Reverse dependencies:

Reverse imports:tramicp,tramvs
Reverse suggests:deeptrafo,tram

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=cotramto link to this page.


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