Provides a set of tools to perform quantitative trait locus (QTL) analysis in experimental crosses. It is a reimplementation of the 'R/qtl' package to better handle high-dimensional data and complex cross designs. Broman et al. (2019) <doi:10.1534/genetics.118.301595>.
| Version: | 0.38 |
| Depends: | R (≥ 3.1.0) |
| Imports: | Rcpp (≥ 1.0.7),yaml (≥ 2.1.13),jsonlite (≥ 0.9.17),data.table (≥ 1.10.4-3), parallel, stats, utils, graphics, grDevices,RSQLite |
| LinkingTo: | Rcpp,RcppEigen |
| Suggests: | testthat,devtools,roxygen2,vdiffr,qtl |
| Published: | 2025-06-02 |
| DOI: | 10.32614/CRAN.package.qtl2 |
| Author: | Karl W Broman [aut, cre], R Core Team [ctb] |
| Maintainer: | Karl W Broman <broman at wisc.edu> |
| BugReports: | https://github.com/rqtl/qtl2/issues |
| License: | GPL-3 |
| Copyright: | Code for Brent's method for univariate function optimizationwas taken from R 3.2.2 (Copyright 1995, 1996 Robert Gentlemanand Ross Ihaka, Copyright 2003-2004 The R Foundation, Copyright1998-2014 The R Core Team). |
| URL: | https://kbroman.org/qtl2/,https://github.com/rqtl/qtl2 |
| NeedsCompilation: | yes |
| Citation: | qtl2 citation info |
| Materials: | README,NEWS |
| CRAN checks: | qtl2 results |