RNeXML: Semantically Rich I/O for the 'NeXML' Format
Provides access to phyloinformatic data in 'NeXML' format. The package should add new functionality to R such as the possibility to manipulate 'NeXML' objects in more various and refined way and compatibility with 'ape' objects.
| Version: | 2.4.11 |
| Depends: | R (≥ 3.0.0),ape (≥ 3.1), methods (≥ 3.0.0) |
| Imports: | XML (≥ 3.95),plyr (≥ 1.8),reshape2 (≥ 1.2.2),httr (≥0.3),uuid (≥ 0.1-1),dplyr (≥ 0.7.0),tidyr (≥ 0.3.1),stringr (≥ 1.0),stringi,xml2,rlang |
| Suggests: | spelling,rdflib,geiger (≥ 2.0),phytools (≥ 0.3.93),knitr (≥ 1.5),rfigshare (≥ 0.3.0),knitcitations (≥ 1.0.1),testthat (≥ 0.10.0),rmarkdown (≥ 0.3.3),xslt,covr,taxalight,progress |
| Published: | 2023-02-01 |
| DOI: | 10.32614/CRAN.package.RNeXML |
| Author: | Carl Boettiger [cre, aut], Scott Chamberlain [aut], Hilmar Lapp [aut], Kseniia Shumelchyk [aut], Rutger Vos [aut] |
| Maintainer: | Carl Boettiger <cboettig at gmail.com> |
| BugReports: | https://github.com/ropensci/RNeXML/issues |
| License: | BSD_3_clause + fileLICENSE |
| URL: | https://docs.ropensci.org/RNeXML/,https://github.com/ropensci/RNeXML |
| NeedsCompilation: | no |
| Language: | en-US |
| Citation: | RNeXML citation info |
| Materials: | README,NEWS |
| In views: | Phylogenetics |
| CRAN checks: | RNeXML results |
Documentation:
| Reference manual: | RNeXML.html ,RNeXML.pdf |
| Vignettes: | The nexml S4 Object (source) A Brief Introduction to RNeXMLL (source) Handling Metadata in RNeXML (source) Extending NeXML to simmap (source) SPARQL with RNeXML (source) |
Downloads:
| Package source: | RNeXML_2.4.11.tar.gz |
| Windows binaries: | r-devel:RNeXML_2.4.11.zip, r-release:RNeXML_2.4.11.zip, r-oldrel:RNeXML_2.4.11.zip |
| macOS binaries: | r-release (arm64):RNeXML_2.4.11.tgz, r-oldrel (arm64):RNeXML_2.4.11.tgz, r-release (x86_64):RNeXML_2.4.11.tgz, r-oldrel (x86_64):RNeXML_2.4.11.tgz |
| Old sources: | RNeXML archive |
Reverse dependencies:
| Reverse imports: | phylobase |
| Reverse suggests: | rotl |
Linking:
Please use the canonical formhttps://CRAN.R-project.org/package=RNeXMLto link to this page.