socialmixr: Social Mixing Matrices for Infectious Disease Modelling
Provides methods for sampling contact matrices from diary data for use in infectious disease modelling, as discussed in Mossong et al. (2008) <doi:10.1371/journal.pmed.0050074>.
| Version: | 0.5.1 |
| Depends: | R (≥ 3.5.0) |
| Imports: | checkmate,countrycode,curl,data.table, grDevices,httr,jsonlite,lifecycle,lubridate,memoise,purrr,oai,wpp2017,xml2,cli,rlang, methods |
| Suggests: | contactsurveys,ggplot2,here,knitr,quarto,reshape2,rmarkdown,roxyglobals (≥ 1.0.0),testthat,withr |
| Published: | 2026-02-04 |
| DOI: | 10.32614/CRAN.package.socialmixr |
| Author: | Sebastian Funk [aut, cre], Lander Willem [aut], Hugo Gruson [aut], Nicholas Tierney [aut], Maria Bekker-Nielsen Dunbar [ctb], Carl A. B. Pearson [ctb], Sam Clifford [ctb], Christopher Jarvis [ctb], Alexis Robert [ctb], Niel Hens [ctb], Pietro Coletti [col, dtm], Lloyd Chapman [ctb] |
| Maintainer: | Sebastian Funk <sebastian.funk at lshtm.ac.uk> |
| BugReports: | https://github.com/epiforecasts/socialmixr/issues |
| License: | MIT + fileLICENSE |
| URL: | https://github.com/epiforecasts/socialmixr,https://epiforecasts.io/socialmixr/ |
| NeedsCompilation: | no |
| Materials: | README,NEWS |
| In views: | Epidemiology |
| CRAN checks: | socialmixr results |
Documentation:
| Reference manual: | socialmixr.html ,socialmixr.pdf |
| Vignettes: | Introduction to socialmixr (source,R code) |
Downloads:
| Package source: | socialmixr_0.5.1.tar.gz |
| Windows binaries: | r-devel:socialmixr_0.5.1.zip, r-release:socialmixr_0.5.1.zip, r-oldrel:socialmixr_0.5.1.zip |
| macOS binaries: | r-release (arm64):socialmixr_0.5.0.tgz, r-oldrel (arm64):socialmixr_0.5.0.tgz, r-release (x86_64):socialmixr_0.5.1.tgz, r-oldrel (x86_64):socialmixr_0.5.1.tgz |
| Old sources: | socialmixr archive |
Reverse dependencies:
| Reverse suggests: | contactsurveys,finalsize,o2geosocial |
Linking:
Please use the canonical formhttps://CRAN.R-project.org/package=socialmixrto link to this page.