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brainGraph: Graph Theory Analysis of Brain MRI Data

A set of tools for performing graph theory analysis of brain MRI data. It works with data from a Freesurfer analysis (cortical thickness, volumes, local gyrification index, surface area), diffusion tensor tractography data (e.g., from FSL) and resting-state fMRI data (e.g., from DPABI). It contains a graphical user interface for graph visualization and data exploration, along with several functions for generating useful figures.

Version:3.1.1
Depends:R (≥ 3.5.0),igraph (≥ 1.2.4)
Imports:abind,data.table (≥ 1.12.4),doParallel,foreach, grid,lattice,MASS,Matrix, methods,permute, parallel
Suggests:Hmisc,ade4,boot,car,expm,ggplot2,ggrepel,gridExtra,mediation,oro.nifti,scales
Published:2025-10-16
DOI:10.32614/CRAN.package.brainGraph
Author:Christopher G. WatsonORCID iD [aut, cre]
Maintainer:Christopher G. Watson <cgwatson at bu.edu>
BugReports:https://groups.google.com/forum/?hl=en#!forum/brainGraph-help
License:GPL-3
URL:https://github.com/cwatson/brainGraph
NeedsCompilation:no
Materials:NEWS
CRAN checks:brainGraph results

Documentation:

Reference manual:brainGraph.html ,brainGraph.pdf

Downloads:

Package source: brainGraph_3.1.1.tar.gz
Windows binaries: r-devel:brainGraph_3.1.1.zip, r-release:brainGraph_3.1.1.zip, r-oldrel:brainGraph_3.1.1.zip
macOS binaries: r-release (arm64):brainGraph_3.1.1.tgz, r-oldrel (arm64):brainGraph_3.1.1.tgz, r-release (x86_64):brainGraph_3.1.1.tgz, r-oldrel (x86_64):brainGraph_3.1.1.tgz
Old sources: brainGraph archive

Reverse dependencies:

Reverse imports:etree,PopulateR,priorCON

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=brainGraphto link to this page.


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