Scelestial infers a lineage tree from single-cell DNA mutation matrix. It generates a tree with approximately maximum parsimony through a Steiner tree approximation algorithm.
| Version: | 1.0.4 |
| Imports: | Rcpp (≥ 1.0.1) |
| LinkingTo: | Rcpp |
| Suggests: | igraph,knitr,rmarkdown,stringr,seqinr,spelling |
| Published: | 2023-11-30 |
| DOI: | 10.32614/CRAN.package.RScelestial |
| Author: | Mohammad Hadi Foroughmand Araabi [aut, cre], Sama Goliaei [aut, ctb], Alice McHardy [ctb] |
| Maintainer: | Mohammad Hadi Foroughmand Araabi <foroughmand at gmail.com> |
| License: | GPL-2 |GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | yes |
| Language: | en-US |
| Materials: | NEWS |
| CRAN checks: | RScelestial results |
| Reference manual: | RScelestial.html ,RScelestial.pdf |
| Vignettes: | RScelestial Vignette (source,R code) |
| Package source: | RScelestial_1.0.4.tar.gz |
| Windows binaries: | r-devel:RScelestial_1.0.4.zip, r-release:RScelestial_1.0.4.zip, r-oldrel:RScelestial_1.0.4.zip |
| macOS binaries: | r-release (arm64):RScelestial_1.0.4.tgz, r-oldrel (arm64):RScelestial_1.0.4.tgz, r-release (x86_64):RScelestial_1.0.4.tgz, r-oldrel (x86_64):RScelestial_1.0.4.tgz |
| Old sources: | RScelestial archive |
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