coda4microbiome: Compositional Data Analysis for Microbiome Studies
Functions for microbiome data analysis that take into account its compositional nature. Performs variable selection through penalized regression for both, cross-sectional and longitudinal studies, and for binary and continuous outcomes.
| Version: | 0.2.4 |
| Depends: | R (≥ 3.5.0) |
| Imports: | corrplot,glmnet,plyr,pROC,ggpubr,ggplot2,ComplexHeatmap,circlize,survival,survminer |
| Suggests: | rmarkdown |
| Published: | 2024-07-17 |
| DOI: | 10.32614/CRAN.package.coda4microbiome |
| Author: | Malu Calle [aut], Toni Susin [aut, cre], Meritxell Pujolassos [aut] |
| Maintainer: | Toni Susin <toni.susin at upc.edu> |
| BugReports: | https://github.com/malucalle/coda4microbiome/issues |
| License: | MIT + fileLICENSE |
| URL: | https://malucalle.github.io/coda4microbiome/ |
| NeedsCompilation: | no |
| In views: | CompositionalData |
| CRAN checks: | coda4microbiome results |
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