hierfstat: Estimation and Tests of Hierarchical F-Statistics
Estimates hierarchical F-statistics from haploid or diploid genetic data with any numbers of levels in the hierarchy, following the algorithm of Yang (Evolution(1998), 52:950). Tests via randomisations the significance of each F and variance components, using the likelihood-ratio statistics G (Goudet et al. (1996) <https://academic.oup.com/genetics/article/144/4/1933/6017091>). Estimates genetic diversity statistics for haploid and diploid genetic datasets in various formats, including inbreeding and coancestry coefficients, and population specific F-statistics following Weir and Goudet (2017) <https://academic.oup.com/genetics/article/206/4/2085/6072590>.
| Version: | 0.5-11 |
| Depends: | R (≥ 2.10) |
| Imports: | ade4,adegenet,gaston,gtools, methods |
| Suggests: | ape,pegas,knitr,rmarkdown,testthat |
| Published: | 2022-05-05 |
| DOI: | 10.32614/CRAN.package.hierfstat |
| Author: | Jerome Goudet [aut, cre], Thibaut Jombart [aut], Zhian N. Kamvar [ctb], Eric Archer [ctb], Olivier Hardy [ctb] |
| Maintainer: | Jerome Goudet <jerome.goudet at unil.ch> |
| BugReports: | https://github.com/jgx65/hierfstat/issues |
| License: | GPL-2 |GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | https://www.r-project.org,https://github.com/jgx65/hierfstat |
| NeedsCompilation: | no |
| CRAN checks: | hierfstat results |
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