EcoCleanR: Automated and Controlled Extraction, Cleaning, and Processing ofOccurrence Data for Generating Biogeographic Ranges of MarineOrganisms
Provides step-by-step automation for integrating biodiversity data from multiple online aggregators, merging and cleaning datasets while addressing challenges such as taxonomic inconsistencies, georeferencing issues, and spatial or environmental outliers. Includes functions to extract environmental data and to define the biogeographic ranges in which species are most likely to occur.
| Version: | 1.0.1 |
| Depends: | R (≥ 3.5) |
| Imports: | dplyr,geodata,geosphere,ggplot2,mregions2,patchwork,rlang,sdmpredictors,sf,taxize,terra,tidyr |
| Suggests: | knitr,rgbif,robis,ridigbio,rmarkdown,testthat (≥ 3.0.0) |
| Published: | 2025-11-19 |
| DOI: | 10.32614/CRAN.package.EcoCleanR |
| Author: | Priyanka Soni [aut, cre], Austin Hendy [aut], David Bottjer [aut], Vijay Barve [ctb] |
| Maintainer: | Priyanka Soni <sonip at usc.edu> |
| License: | MIT + fileLICENSE |
| NeedsCompilation: | no |
| Citation: | EcoCleanR citation info |
| Materials: | README |
| CRAN checks: | EcoCleanR results[issues need fixing before 2025-12-22] |
Documentation:
| Reference manual: | EcoCleanR.html ,EcoCleanR.pdf |
| Vignettes: | data_cleaning (source,R code) data_merging (source,R code) |
Downloads:
| Package source: | EcoCleanR_1.0.1.tar.gz |
| Windows binaries: | r-devel:EcoCleanR_1.0.1.zip, r-release:EcoCleanR_1.0.1.zip, r-oldrel:EcoCleanR_1.0.1.zip |
| macOS binaries: | r-release (arm64):EcoCleanR_1.0.1.tgz, r-oldrel (arm64):EcoCleanR_1.0.1.tgz, r-release (x86_64):EcoCleanR_1.0.1.tgz, r-oldrel (x86_64):EcoCleanR_1.0.1.tgz |
Linking:
Please use the canonical formhttps://CRAN.R-project.org/package=EcoCleanRto link to this page.