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parmigene: Parallel Mutual Information Estimation for Gene NetworkReconstruction

Parallel estimation of the mutual information based on entropy estimates from k-nearest neighbors distances and algorithms for the reconstruction of gene regulatory networks (Sales et al, 2011 <doi:10.1093/bioinformatics/btr274>).

Version:1.1.1
Published:2024-10-21
DOI:10.32614/CRAN.package.parmigene
Author:Gabriele Sales [aut, cre], Chiara Romualdi [aut]
Maintainer:Gabriele Sales <gabriele.sales at unipd.it>
BugReports:https://github.com/sales-lab/parmigene/issues
License:AGPL-3
URL:https://github.com/sales-lab/parmigene
NeedsCompilation:yes
Materials:README
In views:Omics
CRAN checks:parmigene results

Documentation:

Reference manual:parmigene.html ,parmigene.pdf

Downloads:

Package source: parmigene_1.1.1.tar.gz
Windows binaries: r-devel:parmigene_1.1.1.zip, r-release:parmigene_1.1.1.zip, r-oldrel:parmigene_1.1.1.zip
macOS binaries: r-release (arm64):parmigene_1.1.1.tgz, r-oldrel (arm64):parmigene_1.1.1.tgz, r-release (x86_64):parmigene_1.1.1.tgz, r-oldrel (x86_64):parmigene_1.1.1.tgz
Old sources: parmigene archive

Reverse dependencies:

Reverse imports:DysPIA,MetNet,Moonlight2R,MoonlightR,PAC
Reverse suggests:TCGAbiolinks

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=parmigeneto link to this page.


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