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hhmR: Hierarchical Heatmaps

Allows users to create high-quality heatmaps from labelled, hierarchical data. Specifically, for data with a two-level hierarchical structure, it will produce a heatmap where each row and column represents a category at the lower level. These rows and columns are then grouped by the higher-level group each category belongs to, with the names for each category and groups shown in the margins. While other packages (e.g. 'dendextend') allow heatmap rows and columns to be arranged by groups only, 'hhmR' also allows the labelling of the data at both the category and group level.

Version:0.0.1.1
Depends:R (≥ 3.5.0)
Imports:dplyr,purrr,tidyr,rlang, grid,ggplot2,patchwork, grDevices,magrittr, utils
Suggests:knitr,rmarkdown
Published:2025-10-20
DOI:10.32614/CRAN.package.hhmR
Author:Michael MahonyORCID iD [cre, aut, cph], Francisco RoweORCID iD [aut], Carmen Cabrera-ArnauORCID iD [aut]
Maintainer:Michael Mahony <michael.mahony at cantab.net>
BugReports:https://github.com/sgmmahon/hhmR/issues
License:MIT + fileLICENSE
URL:https://github.com/sgmmahon/hhmR,https://sgmmahon.github.io/hhmR/
NeedsCompilation:no
Language:en-GB
Materials:README,NEWS
CRAN checks:hhmR results

Documentation:

Reference manual:hhmR.html ,hhmR.pdf
Vignettes:Hierarchical Heatmaps (hhmR) Vignette (source,R code)

Downloads:

Package source: hhmR_0.0.1.1.tar.gz
Windows binaries: r-devel:hhmR_0.0.1.1.zip, r-release:hhmR_0.0.1.1.zip, r-oldrel:hhmR_0.0.1.1.zip
macOS binaries: r-release (arm64):hhmR_0.0.1.1.tgz, r-oldrel (arm64):hhmR_0.0.1.1.tgz, r-release (x86_64):hhmR_0.0.1.1.tgz, r-oldrel (x86_64):hhmR_0.0.1.1.tgz
Old sources: hhmR archive

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=hhmRto link to this page.


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