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psme: Penalized Splines Mixed-Effects Models

Fit penalized splines mixed-effects models (a special case of additive models) for large longitudinal datasets. The package includes a psme() function that (1) relies on package 'mgcv' for constructing population and subject smooth functions as penalized splines, (2) transforms the constructed additive model to a linear mixed-effects model, (3) exploits package 'lme4' for model estimation and (4) backtransforms the estimated linear mixed-effects model to the additive model for interpretation and visualization. See Pedersen et al. (2019) <doi:10.7717/peerj.6876> and Bates et al. (2015) <doi:10.18637/jss.v067.i01> for an introduction. Unlike the gamm() function in 'mgcv', the psme() function is fast and memory-efficient, able to handle datasets with millions of observations.

Version:1.0.0
Depends:R (≥ 4.0.0)
Imports:stats,Matrix, methods,mgcv,lme4
Published:2025-10-09
DOI:10.32614/CRAN.package.psme
Author:Zheyuan LiORCID iD [aut, cre]
Maintainer:Zheyuan Li <zheyuan.li at bath.edu>
License:GPL-3
URL:https://github.com/ZheyuanLi/psme
NeedsCompilation:no
CRAN checks:psme results

Documentation:

Reference manual:psme.html ,psme.pdf

Downloads:

Package source: psme_1.0.0.tar.gz
Windows binaries: r-devel:psme_1.0.0.zip, r-release:psme_1.0.0.zip, r-oldrel:psme_1.0.0.zip
macOS binaries: r-release (arm64):psme_1.0.0.tgz, r-oldrel (arm64):psme_1.0.0.tgz, r-release (x86_64):psme_1.0.0.tgz, r-oldrel (x86_64):psme_1.0.0.tgz

Linking:

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