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FLightR: Reconstruct Animal Paths from Solar Geolocation Loggers Data

Spatio-temporal locations of an animal are computed from annotated data with a hidden Markov model via particle filter algorithm. The package is relatively robust to varying degrees of shading. The hidden Markov model is described in Movement Ecology - Rakhimberdiev et al. (2015) <doi:10.1186/s40462-015-0062-5>, general package description is in the Methods in Ecology and Evolution - Rakhimberdiev et al. (2017) <doi:10.1111/2041-210X.12765> and package accuracy assessed in the Journal of Avian Biology - Rakhimberdiev et al. (2016) <doi:10.1111/jav.00891>.

Version:0.5.5
Depends:R (≥ 4.1.0)
Imports:bit,geosphere,ggmap,ggplot2,CircStats,circular,fields,maps,mgcv,nlme, parallel,RcppArmadillo,sf,suntools,truncnorm
Suggests:covr,testthat,knitr,rmarkdown
Published:2024-07-04
DOI:10.32614/CRAN.package.FLightR
Author:Eldar Rakhimberdiev [aut, cre], Anatoly Saveliev [aut], Julia Karagicheva [aut], Simeon Lisovski [ctb], Johannes de Groeve [ctb]
Maintainer:Eldar Rakhimberdiev <eldar.rakhimberdiev at uva.nl>
BugReports:https://github.com/eldarrak/FLightR/issues
License:GPL-3
URL:https://CRAN.R-project.org/package=FLightR
NeedsCompilation:no
Citation:FLightR citation info
Materials:README,NEWS
In views:Tracking
CRAN checks:FLightR results

Documentation:

Reference manual:FLightR.html ,FLightR.pdf
Vignettes:FLightR with black-tailed godwit vignette from MEE 2017 (source,R code)

Downloads:

Package source: FLightR_0.5.5.tar.gz
Windows binaries: r-devel:FLightR_0.5.5.zip, r-release:FLightR_0.5.5.zip, r-oldrel:FLightR_0.5.5.zip
macOS binaries: r-release (arm64):FLightR_0.5.5.tgz, r-oldrel (arm64):FLightR_0.5.5.tgz, r-release (x86_64):FLightR_0.5.5.tgz, r-oldrel (x86_64):FLightR_0.5.5.tgz
Old sources: FLightR archive

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=FLightRto link to this page.


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