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PolyHaplotyper: Assignment of Haplotypes Based on SNP Dosages in Diploids andPolyploids

Infer the genetic composition of individuals in terms of haplotype dosages for a haploblock, based on bi-allelic marker dosages, for any ploidy level. Reference: Voorrips and Tumino: PolyHaplotyper: haplotyping in polyploids based on bi-allelic marker dosage data. Submitted to BMC Bioinformatics (2021).

Version:1.0.1
Imports:XML
Suggests:knitr,rmarkdown
Published:2021-06-17
DOI:10.32614/CRAN.package.PolyHaplotyper
Author:Roeland E. Voorrips
Maintainer:Roeland E. Voorrips <roeland.voorrips at wur.nl>
License:GPL-2
NeedsCompilation:no
CRAN checks:PolyHaplotyper results

Documentation:

Reference manual:PolyHaplotyper.html ,PolyHaplotyper.pdf
Vignettes:PolyHaplotyper vignette (source,R code)

Downloads:

Package source: PolyHaplotyper_1.0.1.tar.gz
Windows binaries: r-devel:PolyHaplotyper_1.0.1.zip, r-release:PolyHaplotyper_1.0.1.zip, r-oldrel:PolyHaplotyper_1.0.1.zip
macOS binaries: r-release (arm64):PolyHaplotyper_1.0.1.tgz, r-oldrel (arm64):PolyHaplotyper_1.0.1.tgz, r-release (x86_64):PolyHaplotyper_1.0.1.tgz, r-oldrel (x86_64):PolyHaplotyper_1.0.1.tgz
Old sources: PolyHaplotyper archive

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=PolyHaplotyperto link to this page.


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