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fibos: Occlusion Surface Using the Occluded Surface and FibonacciOccluded Surface

The Occluded Surface (OS) algorithm is a widely used approach for analyzing atomic packing in biomolecules as described by Pattabiraman N, Ward KB, Fleming PJ (1995) <doi:10.1002/jmr.300080603>. Here, we introduce 'fibos', an 'R' and 'Python' package that extends the 'OS' methodology, as presented in Soares HHM, Romanelli JPR, Fleming PJ, da Silveira CH (2024) <doi:10.1101/2024.11.01.621530>.

Version:2.0.1
Depends:R (≥ 4.1.0)
Imports:fs,dplyr,readr,stringr,tidyr,reticulate,glue
Published:2025-06-04
DOI:10.32614/CRAN.package.fibos
Author:Herson Soares [cre, aut], Carlos Silveira [aut], João Romanelli [aut], Patrick Fleming [aut], Posit Software, PBC [cph, fnd]
Maintainer:Herson Soares <hersonhebert at hotmail.com>
License:GPL-3
NeedsCompilation:no
Materials:README
CRAN checks:fibos results

Documentation:

Reference manual:fibos.html ,fibos.pdf

Downloads:

Package source: fibos_2.0.1.tar.gz
Windows binaries: r-devel:fibos_2.0.1.zip, r-release:fibos_2.0.1.zip, r-oldrel:fibos_2.0.1.zip
macOS binaries: r-release (arm64):fibos_2.0.1.tgz, r-oldrel (arm64):fibos_2.0.1.tgz, r-release (x86_64):fibos_2.0.1.tgz, r-oldrel (x86_64):fibos_2.0.1.tgz
Old sources: fibos archive

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=fibosto link to this page.


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