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CEDA: CRISPR Screen and Gene Expression Differential Analysis

Provides analytical methods for analyzing CRISPR screen data at different levels of gene expression. Multi-component normal mixture models and EM algorithms are used for modeling.

Version:1.1.1
Depends:R (≥ 3.5.0),limma
Imports:stats,mixtools,ggplot2,dplyr,ggsci,ggridges,ggprism
Suggests:knitr,rmarkdown
Published:2024-02-27
DOI:10.32614/CRAN.package.CEDA
Author:Lianbo Yu [aut, cre], Yue Zhao [aut], Kevin R. Coombes [aut], Lang Li [aut]
Maintainer:Lianbo Yu <Lianbo.Yu at osumc.edu>
License:Apache License (== 2.0)
NeedsCompilation:no
Materials:README
CRAN checks:CEDA results

Documentation:

Reference manual:CEDA.html ,CEDA.pdf
Vignettes:CRISPR Screen and Gene Expression Differential Analysis (source,R code)

Downloads:

Package source: CEDA_1.1.1.tar.gz
Windows binaries: r-devel:CEDA_1.1.1.zip, r-release:CEDA_1.1.1.zip, r-oldrel:CEDA_1.1.1.zip
macOS binaries: r-release (arm64):CEDA_1.1.1.tgz, r-oldrel (arm64):CEDA_1.1.1.tgz, r-release (x86_64):CEDA_1.1.1.tgz, r-oldrel (x86_64):CEDA_1.1.1.tgz
Old sources: CEDA archive

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=CEDAto link to this page.


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