treedata.table: Manipulation of Matched Phylogenies and Data using 'data.table'
An implementation that combines trait data and a phylogenetic tree (or trees) into a single object of class 'treedata.table'. The resulting object can be easily manipulated to simultaneously change the trait- and tree-level sampling. Currently implemented functions allow users to use a 'data.table' syntax when performing operations on the trait dataset within the 'treedata.table' object. For more details see Roman-Palacios et al. (2021) <doi:10.7717/peerj.12450>.
| Version: | 0.1.1 |
| Depends: | R (≥ 2.10),ape |
| Imports: | lazyeval,geiger, utils,data.table |
| Suggests: | covr,knitr,rmarkdown,testthat,utf8 |
| Published: | 2025-10-09 |
| DOI: | 10.32614/CRAN.package.treedata.table |
| Author: | Josef Uyeda [aut], Cristian Roman-Palacios [aut, cre], April Wright [aut], Luke Harmon [ctb], Hugo Gruson [rev], Kari Norman [rev] |
| Maintainer: | Cristian Roman-Palacios <cromanpa at arizona.edu> |
| BugReports: | https://github.com/ropensci/treedata.table/issues |
| License: | MIT + fileLICENSE |
| URL: | https://ropensci.github.io/treedata.table/,https://docs.ropensci.org/treedata.table/,https://github.com/ropensci/treedata.table/ |
| NeedsCompilation: | no |
| CRAN checks: | treedata.table results |
Documentation:
Downloads:
| Package source: | treedata.table_0.1.1.tar.gz |
| Windows binaries: | r-devel:treedata.table_0.1.1.zip, r-release:treedata.table_0.1.1.zip, r-oldrel:treedata.table_0.1.1.zip |
| macOS binaries: | r-release (arm64):treedata.table_0.1.1.tgz, r-oldrel (arm64):treedata.table_0.1.1.tgz, r-release (x86_64):treedata.table_0.1.1.tgz, r-oldrel (x86_64):treedata.table_0.1.1.tgz |
| Old sources: | treedata.table archive |
Linking:
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