Made a few minor updates to documentation and compilation flags tofix CRAN check errors.
Made a few changes to amend some tests to use functions in the thirdedition of thetestthat package.
Added bisection method for choosing tolerances when multiple datapoints are being used in the ABC-SMC algorithm.
Added option to set minimum tolerances for ABC-SMC.
Changed way that random seeds are passed tomclapply()to aid reproducibility when setting seeds and using parallelisation.Runs will only be reproducible if using the same number of cores eachtime (which can be specified usingmc.cores argument tovarious functions).
Patch release to fix minor bug in thepredict.PMCMCmethod.
Patch release to fix the order in whichtspan objectsare updated in code produced frommparseRcpp.
Patch release to fix a parsing error when compiling models with onlya single transition term.
Patch release to fix a compilation error on Solaris, and also to fixa memory leak error.
First release of SimBIID to CRAN.