AlphaPart: Partition/Decomposition of Breeding Values by Paths ofInformation
A software that implements a method for partitioning genetic trends to quantify the sources of genetic gain in breeding programmes. The partitioning method is described in Garcia-Cortes et al. (2008) <doi:10.1017/S175173110800205X>. The package includes the main function AlphaPart for partitioning breeding values and auxiliary functions for manipulating data and summarizing, visualizing, and saving results.
| Version: | 0.9.8 |
| Depends: | R (≥ 3.5.0) |
| Imports: | directlabels (≥ 1.1),ggplot2 (≥ 0.8.9),pedigree (≥1.3.1),Rcpp (≥ 0.9.4), methods (≥ 3.6.2),reshape,dplyr,magrittr,tibble (≥ 3.1.7) |
| LinkingTo: | Rcpp |
| Suggests: | RColorBrewer (≥ 1.0-2),truncnorm (≥ 1.0-5),knitr,rmarkdown,testthat (≥ 3.0.0),covr,ggridges (≥ 0.5.3) |
| Published: | 2022-11-15 |
| DOI: | 10.32614/CRAN.package.AlphaPart |
| Author: | Gregor Gorjanc [aut, cre], Jana Obsteter [aut], Thiago de Paula Oliveira [aut] |
| Maintainer: | Gregor Gorjanc <highlander.research.lab at gmail.com> |
| License: | GPL-2 |GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | yes |
| CRAN checks: | AlphaPart results |
Documentation:
| Reference manual: | AlphaPart.html ,AlphaPart.pdf |
| Vignettes: | PartitioningVariance (source,R code) AlphaPart (source,R code) |
Downloads:
| Package source: | AlphaPart_0.9.8.tar.gz |
| Windows binaries: | r-devel:AlphaPart_0.9.8.zip, r-release:AlphaPart_0.9.8.zip, r-oldrel:AlphaPart_0.9.8.zip |
| macOS binaries: | r-release (arm64):AlphaPart_0.9.8.tgz, r-oldrel (arm64):AlphaPart_0.9.8.tgz, r-release (x86_64):AlphaPart_0.9.8.tgz, r-oldrel (x86_64):AlphaPart_0.9.8.tgz |
| Old sources: | AlphaPart archive |
Linking:
Please use the canonical formhttps://CRAN.R-project.org/package=AlphaPartto link to this page.