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Tmisc 1.0.1

• Remove functions deprecated >2 years ago.
• Fix package level documentation.

Tmisc 1.0.0

• Bugfixes for R devel checks.
• Move orphan functions to utils.
• Deprecated many long superseded functions.
• Deprecated some no longer useful gene expression functions.
• New PDF template.

Tmisc 0.1.22

• Bugfixes for R 4.0.0 compatibility.

Tmisc 0.1.20

• Deprecated several functions in favor of tidyversealternatives.
• Modified PDF template.

Tmisc 0.1.19

This is primarily a cleanup release. Several functions were includedin the Tmisc package early on while packages such asjanitor were indevelopment. This release removes (note,removes, doesn’tdeprecate) functions that were previously copied from other packages,introducing a few potentially breaking changes.

• Removedset_names() as this is exported fromrlang.
• Removedbeep(). Use thebeeprpackage instead.
• Removedremove_empty_cols(),remove_empty_rows(),convert_to_NA() andclean_names(). Useremove_empty(), etc., fromthejanitorpackage instead.
• Removedunrowname(). Usemagrittr::set_rownames() (loaded with tidyverse).

Tmisc 0.1.18

• Added an RMarkdown template.

Tmisc 0.1.17

• Add in to insert=. Optionally map the keyboardshortcut to Alt+- to insert= instead of thetraditional<-.

Tmisc 0.1.16

• New functions%like% and%nlike% work like%in% and%nin%, but where the second argumentis a regular expression to match.
• New functiongt2refalt() creates a two-letter genotypefrom a GT field from a VCF file.
• Installs an RStudio add-in to insert%in%.
• Added aliases for low-level manipulation in a dplyr pipeline:
  • brackets()
  • dollar()
  • is_in()
  • and()
  • or()
  • equals()
  • is_gt()
  • is_geq()
  • is_lt()
  • is_leq()
  • not()
  • set_colnames()
  • set_rownames()
  • set_names()
  • set_attributes()
  • set_attr()

Tmisc 0.1.15

• New functionmat2df() creates a pairwise distance dataframe from a square matrix.

Tmisc 0.1.14

• keep_top_n() thanks toJeroenJanssens.
• deseqresult2tbl() now lets you name the columnextracted from the DESeq result’srownames anything youwant.
• Added the Datasaurus Dozen.
• Small updates to enable documentation withpkgdown.
• Inconsequential update to%nin%.

Tmisc 0.1.13

• Cs() (fromHmisc): Conveniencefunction to create a quoted character vector from unquoted strings.

Tmisc 0.1.12

• Minor bugfixes

Tmisc 0.1.11

• convert_to_NA() converts string values to trueNA values (adapted fromsfirke/janitor)
• clean_names() cleans up the names in a data frame.Resulting names are unique and consist only of the_character, lowercase letters, and numbers (taken fromsfirke/janitor).
• remove_empty_rows() andremove_empty_cols() removes any rows or columns composedentirely ofNA values (taken fromsfirke/janitor).

Tmisc 0.1.10

• Tpairs() displays better pairwise scatterplot matricesthanpairs().
• Thist() plots a histogram with either a normaldistribution or density plot overlay.
• corner() displays the first few rows and columns of adata frame or matrix.
• beep() plays a short beep to alert when something’sdone (from the beepr package).

Tmisc 0.1.9

• Minor bugfixes.

Tmisc 0.1.8

• jsd() compute the Jensen-Shannon divergence from amatrix of probabilities.
• Mode() returns the mode of a vector.
• gg_na() produces a plot showing the missing values in adata frame.
• are_all_equal() assess whether all the components of anumeric vector are (approximately) equal.

Tmisc 0.1.7

• gghues() generates color palette emulating ggplot2’sdefault hues.

Tmisc 0.1.6

• fisherp() uses Fisher’s method to combinep-values.

Tmisc 0.1.5

• dokuwiki() will convert a data.frame to adokuwiki-formatted table, and will copy said table to the systemclipboard if you’re on Mac OS X.

Tmisc 0.1.4

• strSort() alphabetically sorts characters in astring.