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PhenotypeR: Assess Study Cohorts Using a Common Data Model

Phenotype study cohorts in data mapped to the Observational Medical Outcomes Partnership Common Data Model. Diagnostics are run at the database, code list, cohort, and population level to assess whether study cohorts are ready for research.

Version:	0.2.0
Depends:	R (≥ 4.1.0)
Imports:	CodelistGenerator (≥ 3.4.0),CohortCharacteristics (≥1.0.0),CohortConstructor (≥ 0.4.0),cli,dplyr,IncidencePrevalence (≥ 1.2.0),omopgenerics (≥ 1.2.0),OmopSketch (≥ 0.5.0),magrittr,purrr,rlang,vctrs,MeasurementDiagnostics (≥ 0.1.0),readr
Suggests:	CDMConnector (≥ 1.6.1),duckdb,DBI,gt,omock,testthat (≥3.0.0),knitr,glue,RPostgres,PatientProfiles (≥ 1.2.2),ggplot2,ggpubr,stringr,shiny (≥ 1.11.1),DiagrammeR,DiagrammeRsvg,reactable,reactablefmtr,rsvg,sortable,shinycssloaders,here,DT,bslib,shinyWidgets,plotly,tidyr,scales,usethis,rmarkdown,CohortSurvival (≥ 1.0.2),ellmer,htmltools,visOmopResults (≥ 1.0.0),rsconnect,cpp11,progress
Published:	2025-07-31
DOI:	10.32614/CRAN.package.PhenotypeR
Author:	Edward Burn [aut, cre], Marti Catala [aut], Xihang Chen [aut], Marta Alcalde-Herraiz [aut], Nuria Mercade-Besora [aut], Albert Prats-Uribe [aut]
Maintainer:	Edward Burn <edward.burn at ndorms.ox.ac.uk>
License:	Apache License (≥ 2)
URL:	https://ohdsi.github.io/PhenotypeR/
NeedsCompilation:	no
Materials:	README
CRAN checks:	PhenotypeR results[issues need fixing before 2026-01-15]

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