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SomaDataIO: Input/Output 'SomaScan' Data

Load and export 'SomaScan' data via the 'Standard BioTools, Inc.' structured text file called an ADAT ('*.adat'). For file format see <https://github.com/SomaLogic/SomaLogic-Data/blob/main/README.md>. The package also exports auxiliary functions for manipulating, wrangling, and extracting relevant information from an ADAT object once in memory.

Version:6.4.0
Depends:R (≥ 4.1.0)
Imports:cli,dplyr (≥ 1.0.6),ggplot2,lifecycle (≥ 1.0.0),magrittr (≥ 2.0.1), methods,readxl (≥ 1.3.1),tibble (≥ 3.1.2),tidyr (≥ 1.1.3)
Suggests:Biobase,knitr,purrr,recipes,rlang,rmarkdown,spelling,testthat (≥ 3.0.0),usethis (≥ 2.0.1),withr
Published:2025-08-29
DOI:10.32614/CRAN.package.SomaDataIO
Author:Stu FieldORCID iD [aut], Caleb Scheidel [cre], Standard BioTools, Inc. [cph, fnd]
Maintainer:Caleb Scheidel <calebjscheidel at gmail.com>
BugReports:https://github.com/SomaLogic/SomaDataIO/issues
License:MIT + fileLICENSE
Copyright:Standard BioTools, Inc. 2025
URL:https://somalogic.github.io/SomaDataIO/,https://somalogic.com
NeedsCompilation:no
Language:en-US
Materials:README,NEWS
CRAN checks:SomaDataIO results

Documentation:

Reference manual:SomaDataIO.html ,SomaDataIO.pdf
Vignettes:Introduction to SomaDataIO (source,R code)

Downloads:

Package source: SomaDataIO_6.4.0.tar.gz
Windows binaries: r-devel:SomaDataIO_6.4.0.zip, r-release:SomaDataIO_6.4.0.zip, r-oldrel:SomaDataIO_6.4.0.zip
macOS binaries: r-release (arm64):SomaDataIO_6.4.0.tgz, r-oldrel (arm64):SomaDataIO_6.4.0.tgz, r-release (x86_64):SomaDataIO_6.4.0.tgz, r-oldrel (x86_64):SomaDataIO_6.4.0.tgz
Old sources: SomaDataIO archive

Reverse dependencies:

Reverse suggests:SomaScan.db

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=SomaDataIOto link to this page.


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