Imports real-time thermo cycler (qPCR) data from Real-time PCR Data Markup Language (RDML) and transforms to the appropriate formats of the 'qpcR' and 'chipPCR' packages, as described in Rodiger et al. (2017) <doi:10.1093/bioinformatics/btx528>. Contains a dendrogram visualization for the structure of RDML object and GUI for RDML editing.
| Version: | 1.1 |
| Depends: | R (≥ 3.2.0) |
| Imports: | checkmate (≥ 1.6.2),data.table,pipeR,readxl,rlist (≥0.4),R6 (≥ 2.0.1),stringr, tools (≥ 3.2),xml2 (≥ 1.0),lubridate (≥ 1.6.0) |
| Suggests: | chipPCR,magrittr,reshape2,qpcR,dplyr,ggplot2,knitr,kfigr,MBmca,shiny,shinyjs,shinythemes,V8,testthat |
| Published: | 2025-07-23 |
| DOI: | 10.32614/CRAN.package.RDML |
| Author: | Konstantin Blagodatskikh [cre, aut], Stefan Roediger [aut], Michal Burdukiewicz [aut], Andrej-Nikolai Spiess [aut] |
| Maintainer: | Konstantin Blagodatskikh <k.blag at yandex.ru> |
| License: | MIT + fileLICENSE |
| URL: | https://github.com/PCRuniversum/RDML |
| NeedsCompilation: | no |
| Materials: | README,ChangeLog |
| CRAN checks: | RDML results |