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mstherm: Analyze MS/MS Protein Melting Data

Software to aid in modeling and analyzing mass-spectrometry-based proteome melting data. Quantitative data is imported and normalized and thermal behavior is modeled at the protein level. Methods exist for normalization, modeling, visualization, and export of results. For a general introduction to MS-based thermal profiling, see Savitski et al. (2014) <doi:10.1126/science.1255784>.

Version:0.4.7
Imports:foreach, parallel,doParallel,nls2,RColorBrewer,plotrix
Suggests:RSQLite,testthat,knitr,rmarkdown
Published:2017-04-27
DOI:10.32614/CRAN.package.mstherm
Author:Jeremy Volkening [aut, cre]
Maintainer:Jeremy Volkening <jdv at base2bio.com>
License:GPL-3
NeedsCompilation:no
Materials:README,NEWS
CRAN checks:mstherm results

Documentation:

Reference manual:mstherm.html ,mstherm.pdf
Vignettes:Thermal proteome profiling with MSTherm (source,R code)

Downloads:

Package source: mstherm_0.4.7.tar.gz
Windows binaries: r-devel:mstherm_0.4.7.zip, r-release:mstherm_0.4.7.zip, r-oldrel:mstherm_0.4.7.zip
macOS binaries: r-release (arm64):mstherm_0.4.7.tgz, r-oldrel (arm64):mstherm_0.4.7.tgz, r-release (x86_64):mstherm_0.4.7.tgz, r-oldrel (x86_64):mstherm_0.4.7.tgz

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=msthermto link to this page.


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