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myTAI: Evolutionary Transcriptomics

Investigate the evolution of biological processes by capturing evolutionary signatures in transcriptomes (Drost et al. (2018) <doi:10.1093/bioinformatics/btx835>). This package aims to provide a transcriptome analysis environment to quantify the average evolutionary age of genes contributing to a transcriptome of interest.

Version:	2.3.4
Depends:	R (≥ 4.1)
Imports:	S7,patchwork,purrr,tidyr,Rcpp,memoise,fitdistrplus (≥1.1-5),dplyr (≥ 0.3.0),RColorBrewer (≥ 1.1-2),ggplot2 (≥1.0.1),ggforce,ggridges,ggtext,readr (≥ 0.2.2),tibble,ggplotify,ggrepel,Matrix,pheatmap
LinkingTo:	RcppArmadillo,RcppThread,Rcpp
Suggests:	knitr (≥ 1.6),rmarkdown (≥ 0.3.3),testthat (≥ 0.9.1),mgcv,Seurat,SeuratObject,uwot,decor,DESeq2,gganimate,taxize
Published:	2025-11-11
DOI:	10.32614/CRAN.package.myTAI
Author:	Hajk-Georg Drost [aut, cre], Stefan Manolache [aut, ctb], Jaruwatana Sodai Lotharukpong [aut, ctb], Nikola Kalábová [aut, ctb], Filipa Martins Costa [aut, ctb], Kristian K Ullrich [aut, ctb]
Maintainer:	Hajk-Georg Drost <hajk-georg.drost at tuebingen.mpg.de>
BugReports:	https://github.com/drostlab/myTAI/issues
License:	GPL-2
URL:	https://drostlab.github.io/myTAI/
NeedsCompilation:	yes
Citation:	myTAI citation info
Materials:	README,NEWS
CRAN checks:	myTAI results

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