o2ools: Tools for 'outbreaker2'
Streamlines the post-processing, summarization, and visualization of 'outbreaker2' output via a suite of helper functions. Facilitates tidy manipulation of posterior samples, integration with case metadata, generation of diagnostic plots and summary statistics.
| Version: | 0.0.1 |
| Depends: | R (≥ 3.5) |
| Suggests: | knitr,rmarkdown,testthat (≥ 3.0.0),outbreaker2,incidence2,mixtree,epicontacts,dplyr,tidyr,furrr,ggplot2,igraph,tidygraph,ggraph |
| Published: | 2025-06-06 |
| DOI: | 10.32614/CRAN.package.o2ools |
| Author: | Cyril Geismar [aut, cre] |
| Maintainer: | Cyril Geismar <c.geismar21 at imperial.ac.uk> |
| BugReports: | https://github.com/CyGei/o2ools/issues |
| License: | MIT + fileLICENSE |
| URL: | https://github.com/CyGei/o2ools,https://cygei.github.io/o2ools/ |
| NeedsCompilation: | no |
| Materials: | README,NEWS |
| CRAN checks: | o2ools results |
Documentation:
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