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etm: Empirical Transition Matrix

The etm (empirical transition matrix) package permits to estimate the matrix of transition probabilities for any time-inhomogeneous multi-state model with finite state space using the Aalen-Johansen estimator. Functions for data preparation and for displaying are also included (Allignol et al., 2011 <doi:10.18637/jss.v038.i04>). Functionals of the Aalen-Johansen estimator, e.g., excess length-of-stay in an intermediate state, can also be computed (Allignol et al. 2011 <doi:10.1007/s00180-010-0200-x>).

Version:1.1.2
Depends:R (≥ 3.0.0)
Imports:survival,lattice,data.table,Rcpp (≥ 0.11.4)
LinkingTo:Rcpp,RcppArmadillo
Suggests:ggplot2,kmi,geepack
Published:2025-04-12
DOI:10.32614/CRAN.package.etm
Author:Arthur Allignol [aut], Mark Clements [cre, aut]
Maintainer:Mark Clements <mark.clements at ki.se>
License:MIT + fileLICENSE
NeedsCompilation:yes
Citation:etm citation info
Materials:README
In views:Epidemiology,Survival
CRAN checks:etm results

Documentation:

Reference manual:etm.html ,etm.pdf
Vignettes:Computing Cumulative Incidence Functions with the etmCIF Function (source)

Downloads:

Package source: etm_1.1.2.tar.gz
Windows binaries: r-devel:etm_1.1.2.zip, r-release:etm_1.1.2.zip, r-oldrel:etm_1.1.2.zip
macOS binaries: r-release (arm64):etm_1.1.2.tgz, r-oldrel (arm64):etm_1.1.2.tgz, r-release (x86_64):etm_1.1.2.tgz, r-oldrel (x86_64):etm_1.1.2.tgz
Old sources: etm archive

Reverse dependencies:

Reverse imports:Epi,savvyr
Reverse enhances:markovchain,TPmsm

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=etmto link to this page.


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