RcppPlanc: Parallel Low-Rank Approximation with Nonnegativity Constraints
'Rcpp' bindings for 'PLANC', a highly parallel and extensible NMF/NTF (Non-negative Matrix/Tensor Factorization) library. Wraps algorithms described in Kannan et. al (2018) <doi:10.1109/TKDE.2017.2767592> and Eswar et. al (2021) <doi:10.1145/3432185>. Implements algorithms described in Welch et al. (2019) <doi:10.1016/j.cell.2019.05.006>, Gao et al. (2021) <doi:10.1038/s41587-021-00867-x>, and Kriebel & Welch (2022) <doi:10.1038/s41467-022-28431-4>.
| Version: | 2.0.13 |
| Depends: | R (≥ 3.5) |
| Imports: | methods,Rcpp,Matrix,hdf5r.Extra |
| LinkingTo: | Rcpp,RcppArmadillo,RcppProgress,HighFive |
| Suggests: | knitr,withr,rmarkdown,testthat (≥ 3.0.0) |
| Published: | 2025-07-14 |
| DOI: | 10.32614/CRAN.package.RcppPlanc |
| Author: | Andrew Robbins [aut, cre], Yichen Wang [aut], Joshua Welch [cph], Ramakrishnan Kannan [cph], Conrad Sanderson [cph], Blue Brain Project/EPFL [cph] (HighFive Headers), UT-Batelle [cph] (The original PLANC code) |
| Maintainer: | Andrew Robbins <robbiand at umich.edu> |
| BugReports: | https://github.com/welch-lab/RcppPlanc/issues/ |
| License: | GPL-2 |GPL-3 [expanded from: GPL (≥ 2)] |
| Copyright: | see fileCOPYRIGHTS |
| URL: | https://github.com/welch-lab/RcppPlanc/ |
| NeedsCompilation: | yes |
| SystemRequirements: | C++17, cmake >= 3.21.0, hdf5, git, patch, gnumake,hwloc, GNU make |
| Materials: | README,NEWS |
| CRAN checks: | RcppPlanc results |
Documentation:
| Reference manual: | RcppPlanc.html ,RcppPlanc.pdf |
| Vignettes: | RcppPlanc, Fast NMF and iNMF Implementation with C++ (source,R code) |
Downloads:
| Package source: | RcppPlanc_2.0.13.tar.gz |
| Windows binaries: | r-devel:RcppPlanc_2.0.13.zip, r-release:RcppPlanc_2.0.13.zip, r-oldrel:RcppPlanc_2.0.13.zip |
| macOS binaries: | r-release (arm64):RcppPlanc_2.0.13.tgz, r-oldrel (arm64):RcppPlanc_2.0.13.tgz, r-release (x86_64):RcppPlanc_2.0.13.tgz, r-oldrel (x86_64):RcppPlanc_2.0.13.tgz |
| Old sources: | RcppPlanc archive |
Reverse dependencies:
| Reverse imports: | rliger |
Linking:
Please use the canonical formhttps://CRAN.R-project.org/package=RcppPlancto link to this page.