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DAISIE: Dynamical Assembly of Islands by Speciation, Immigration andExtinction

Simulates and computes the (maximum) likelihood of a dynamical model of island biota assembly through speciation, immigration and extinction. See Valente et al. (2015) <doi:10.1111/ele.12461>.

Version:	4.6.0
Depends:	R (≥ 4.2.0)
Imports:	DDD (≥ 5.0),deSolve,doParallel,foreach, graphics,magrittr,Matrix, parallel,pracma,Rcpp (≥ 1.0.10), stats,subplex,tensor,testit, utils
LinkingTo:	Rcpp (≥ 1.0.10),RcppEigen,BH (≥ 1.81.0-1)
Suggests:	ape,covr,dplyr,future,future.apply,ggplot2,ggtree (≥3.0.0),gridExtra,knitr,phytools,purrr,rmarkdown,testthat (≥ 2.1.0),tibble,tidytree,tidyr
Enhances:	doMC
Published:	2025-06-01
DOI:	10.32614/CRAN.package.DAISIE
Author:	Rampal S. Etienne [aut, cre], Luis Valente [aut], Albert B. Phillimore [aut], Bart Haegeman [aut], Joshua W. Lambert [aut], Pedro Santos Neves [aut], Shu Xie [aut], Richèl J.C. Bilderbeek [aut], Hanno Hildenbrandt [aut], Torsten Hauffe [ctb], Giovanni Laudanno [ctb], Nadiah Kristensen [ctb], Ornela Dehayem Nanwou [ctb], Raphael Scherrer [ctb]
Maintainer:	Rampal S. Etienne <r.s.etienne at rug.nl>
BugReports:	https://github.com/rsetienne/DAISIE/issues
License:	GPL (≥ 3) | fileLICENSE
Copyright:	See the file COPYRIGHTS for various DAISIE copyright details DAISIE copyright details
URL:	https://github.com/rsetienne/DAISIE,https://rsetienne.github.io/DAISIE/
NeedsCompilation:	yes
SystemRequirements:	C++17
Materials:	NEWS
CRAN checks:	DAISIE results

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