rarestR: Rarefaction-Based Species Richness Estimator
Calculate rarefaction-based alpha- and beta-diversity. Offer parametric extrapolation to estimate the total expected species in a single community and the total expected shared species between two communities. Visualize the curve-fitting for these estimators.
| Version: | 1.1.1 |
| Depends: | R (≥ 3.5.0) |
| Imports: | Rdpack |
| Suggests: | knitr,rmarkdown,testthat (≥ 3.0.0) |
| Published: | 2025-03-30 |
| DOI: | 10.32614/CRAN.package.rarestR |
| Author: | Peng Zhao [aut, cre], Yi Zou [aut] |
| Maintainer: | Peng Zhao <pengzhao20 at outlook.com> |
| BugReports: | https://github.com/pzhaonet/rarestR/issues |
| License: | MIT + fileLICENSE |
| URL: | https://github.com/pzhaonet/rarestR,https://pzhaonet.github.io/rarestr/ |
| NeedsCompilation: | no |
| Citation: | rarestR citation info |
| CRAN checks: | rarestR results |
Documentation:
| Reference manual: | rarestR.html ,rarestR.pdf |
| Vignettes: | rarestR: An R package using rarefaction metrics to estimate α-diversity and β-diversity for incomplete samples (source,R code) |
Downloads:
| Package source: | rarestR_1.1.1.tar.gz |
| Windows binaries: | r-devel:rarestR_1.1.1.zip, r-release:rarestR_1.1.1.zip, r-oldrel:rarestR_1.1.1.zip |
| macOS binaries: | r-release (arm64):rarestR_1.1.1.tgz, r-oldrel (arm64):rarestR_1.1.1.tgz, r-release (x86_64):rarestR_1.1.1.tgz, r-oldrel (x86_64):rarestR_1.1.1.tgz |
| Old sources: | rarestR archive |
Linking:
Please use the canonical formhttps://CRAN.R-project.org/package=rarestRto link to this page.