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GSEMA: Gene Set Enrichment Meta-Analysis

Performing the different steps of gene set enrichment meta-analysis. It provides different functions that allow the application of meta-analysis based on the combination of effect sizes from different pathways in different studies to obtain significant pathways that are common to all of them.

Version:0.99.4
Depends:R (≥ 4.4)
Imports:Biobase,limma,Rdpack,GSVA,progress,pbapply,doParallel, parallel,BiocParallel,metafor,RColorBrewer,pheatmap, methods,scales,plyr, grDevices, stats,impute
Suggests:BiocStyle,qpdf,BiocGenerics,RUnit,knitr,rmarkdown
Published:2025-10-16
DOI:10.32614/CRAN.package.GSEMA
Author:Juan Antonio Villatoro-García [aut, cre], Pablo Jurado-Bascón [aut], Pedro Carmona-Sáez [aut]
Maintainer:Juan Antonio Villatoro-García <juanantoniovillatorogarcia at gmail.com>
License:GPL-2
NeedsCompilation:no
Materials:NEWS
In views:MetaAnalysis
CRAN checks:GSEMA results

Documentation:

Reference manual:GSEMA.html ,GSEMA.pdf
Vignettes:Gene Set Enrichment Meta-Analysis with GSEMA package (source,R code)

Downloads:

Package source: GSEMA_0.99.4.tar.gz
Windows binaries: r-devel:GSEMA_0.99.4.zip, r-release:GSEMA_0.99.4.zip, r-oldrel:GSEMA_0.99.4.zip
macOS binaries: r-release (arm64):GSEMA_0.99.4.tgz, r-oldrel (arm64):GSEMA_0.99.4.tgz, r-release (x86_64):GSEMA_0.99.4.tgz, r-oldrel (x86_64):GSEMA_0.99.4.tgz
Old sources: GSEMA archive

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=GSEMAto link to this page.


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