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hsphase: Phasing, Pedigree Reconstruction, Sire Imputation andRecombination Events Identification of Half-sib Families UsingSNP Data

Identification of recombination events, haplotype reconstruction, sire imputation and pedigree reconstruction using half-sib family SNP data.

Version:2.0.4
Depends:snowfall, R (≥ 3.1.0)
Imports:Rcpp
LinkingTo:RcppArmadillo (≥ 0.4.300.8.0),Rcpp (≥ 0.11.2)
Published:2025-04-06
DOI:10.32614/CRAN.package.hsphase
Author:Mohammad Ferdosi [aut, cre], Cedric Gondro [aut]
Maintainer:Mohammad Ferdosi <mhferdosi at yahoo.com>
License:GPL-3
NeedsCompilation:yes
Citation:hsphase citation info
CRAN checks:hsphase results

Documentation:

Reference manual:hsphase.html ,hsphase.pdf
Vignettes:A brief vignette to illustrate the usage of the main functions of hsphase (source,R code)

Downloads:

Package source: hsphase_2.0.4.tar.gz
Windows binaries: r-devel:hsphase_2.0.4.zip, r-release:hsphase_2.0.4.zip, r-oldrel:hsphase_2.0.4.zip
macOS binaries: r-release (arm64):hsphase_2.0.4.tgz, r-oldrel (arm64):hsphase_2.0.4.tgz, r-release (x86_64):hsphase_2.0.4.tgz, r-oldrel (x86_64):hsphase_2.0.4.tgz
Old sources: hsphase archive

Reverse dependencies:

Reverse imports:hsrecombi

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=hsphaseto link to this page.


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