Movatterモバイル変換

flipr 0.3.3

Remove any occurrence of base-R pipe operator in favor ofmagrittr pipeoperator for now for backward compatibility with older versions ofR.
Improved way of handling statistics that rely on inter-pointdistances.
Method$get_value() gains optional argumentskeep_null_distribution andkeep_permutationsin case the user would like to keep track of either the permutation nulldistribution or the sampled permutations that have been used to produceit.
Method$get_value() now handles extra parameters to bepassed to the test statistics.

The API has been changed:

AnR6 class is now used to definethe plausibility function, with methods that implement point estimation,confidence intervals and evaluation on grid for later plotting.
The plotting capability is still outside the class but might moveinto the class methods as well in the future.

Test statistics based on Inter-point distances have been added andimplemented in C++ through theRcpppackage.
Test coverage is set and achieves 20% coverage for now (#3,@C-Juliette).
@C-Juliettehas been added as contributor to the package.
The p-value function has been consistently renamed plausibilityfunction to better reflects what it stands for and avoid confusion withother definitions of the p-value function in the area of functional dataanalysis.

Fix warning when installing the package on Oracle Solaris 10, x86,32 bit, R-release due to pandoc version not available preventing thepvalue-function vignette from knitting properly.

Compute p-value surfaces when inferring multiple parameters at onceviatwo_sample_pf();
Compute a point estimation for a single parameter of interest viatwo_sample_pe();
Compute a confidence interval for a single parameter of interest viatwo_sample_ci();
Automatically draw the p-value function for a single parameter ofinterest viatwo_sample_viz().

Change argument namestest andcombining_function totype andcombine_with respectively. Add argumentalternative to specify which kind of test isperformed.
Add a function to compute p-value functions for sets of nullhypotheses.
Draft of article illustrating the computation of p-value functionswithflipr.
Add$t$, mean and Fisher teststatistics.
Correct two-tail p-value computation.
Better API for pvalue function.
Added a function for two sample confidence interval for a singleparameter.
Added an article about permutation inference overview.
Added dependency to theggplot2package for plotting features.
Added dependency to thecli package fordisplaying important information to the user in an elegant fashion.
Added function for point estimation of a single parameter.
Added function for confidence interval of a single parameter.
Added function for automatic plotting of the p-value function of asingle parameter.
Added dependency to thewithr package forproperly handle local random seed generator settings.
Added dependency to theviridisLitepackage for using colors compatible with most common types of colorblindness.

Fix warning when installing the package on Oracle Solaris 10, x86,32 bit, R-release due to pandoc version not available.
Switch to GPL-3 license becausepurrr dependency isGPL-3 licensed.