smer: Sparse Marginal Epistasis Test
The Sparse Marginal Epistasis Test is a computationally efficient genetics method which detects statistical epistasis in complex traits; see Stamp et al. (2025, <doi:10.1101/2025.01.11.632557>) for details.
| Version: | 0.0.2 |
| Depends: | R (≥ 4.4.0) |
| Imports: | dplyr,genio,logging,mvMAPIT,Rcpp,tidyr |
| LinkingTo: | BH,HighFive,Rcpp,RcppEigen,Rhdf5lib,testthat |
| Suggests: | GenomicRanges,ggplot2,knitr,rmarkdown,testthat (≥3.0.0),xml2 |
| Published: | 2025-08-22 |
| DOI: | 10.32614/CRAN.package.smer |
| Author: | Julian Stamp [cre, aut], Lorin Crawford [aut], sriramlab [cph] (Author of included mailman algorithm) |
| Maintainer: | Julian Stamp <julian.d.stamp at gmail.com> |
| BugReports: | https://github.com/lcrawlab/sme/issues |
| License: | MIT + fileLICENSE |
| URL: | https://github.com/lcrawlab/sme,https://lcrawlab.github.io/sme/ |
| NeedsCompilation: | yes |
| SystemRequirements: | GNU make |
| Materials: | README,NEWS |
| CRAN checks: | smer results |
Documentation:
Downloads:
| Package source: | smer_0.0.2.tar.gz |
| Windows binaries: | r-devel:smer_0.0.2.zip, r-release:smer_0.0.2.zip, r-oldrel:smer_0.0.2.zip |
| macOS binaries: | r-release (arm64): not available, r-oldrel (arm64): not available, r-release (x86_64): not available, r-oldrel (x86_64): not available |
| Old sources: | smer archive |
Linking:
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