Movatterモバイル変換

dcifer 1.5.0

• New: a functionmixMat() that combines two triangularmatrices into one square matrix (useful for plotting).
• Changes toplotRel() function:
• Highlighted (statistically significant) entries are now specified bya logical square matrix
• These entries can be either outlined in a different color or“amplified” (made larger than other entries), which is useful for largedatasets

dcifer 1.4.0

• Added: one-sided (one-tailed) tests for functionsibdPair(),ibdDat(), andibdEstM(). The argumentside indicates if aone- or two-sided test is performed and the side for the one-sidedtest.
• matchAfreq() function now provides both updateddsmp andafreq (outputting a list of twocorresponding elements). The new version allows for “extra” alleles inbothdsmp andafreq.
• Minor updates/fixes:
  • NA returned when there are no loci with data in both samples
  • names for COI match sample ID’s

dcifer 1.3.0

• FunctioncalcAfreq() adjusted to exclude missing data(per ID at a locus)

dcifer 1.2.1

• Single locus data now allowed.

dcifer 1.2.0

• New: functionsformatDat() andformatAfreq() that reformat data frames containing sampledata and population allele frequencies in long formats.

dcifer 1.1.1

• Fix:logReval() now covers all relevant edgecases.

dcifer 1.1.0

• Special case added: loci with no shared alleles (moreefficient);
• logReval() now has an argumentequalr andperforms additional checks. Can provideequalr = TRUE and M> 1; the result is reflected in thesum1r element of theoutput.

dcifer 1.0.1

First public release.