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HMP: Hypothesis Testing and Power Calculations for ComparingMetagenomic Samples from HMP

Using Dirichlet-Multinomial distribution to provide several functions for formal hypothesis testing, power and sample size calculations for human microbiome experiments.

Version:2.0.1
Depends:R (≥ 3.1.0),dirmult
Imports:ggplot2, stats,foreach,doParallel,MASS,vegan,gplots,rpart,rpart.plot, parallel, graphics,lattice
Published:2019-08-31
DOI:10.32614/CRAN.package.HMP
Author:Patricio S. La Rosa, Elena Deych, Sharina Carter, Berkley Shands, Dake Yang, William D. Shannon
Maintainer:Berkley Shands <rpackages at biorankings.com>
License:Apache License (== 2.0)
NeedsCompilation:no
Materials:NEWS
CRAN checks:HMP results

Documentation:

Reference manual:HMP.html ,HMP.pdf
Vignettes:Figures from Reference Paper (source,R code)

Downloads:

Package source: HMP_2.0.1.tar.gz
Windows binaries: r-devel:HMP_2.0.1.zip, r-release:HMP_2.0.1.zip, r-oldrel:HMP_2.0.1.zip
macOS binaries: r-release (arm64):HMP_2.0.1.tgz, r-oldrel (arm64):HMP_2.0.1.tgz, r-release (x86_64):HMP_2.0.1.tgz, r-oldrel (x86_64):HMP_2.0.1.tgz
Old sources: HMP archive

Reverse dependencies:

Reverse imports:HMPTrees
Reverse suggests:crumblr

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=HMPto link to this page.


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